ZEB1 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ZEB1

Zinc finger E-box binding homeobox 1. (1122 aa)

Predicted Functional Partners:

CTBP2

0.968

CTBP1

0.968

EP300

0.960

SIRT1

0.957

KMT5A

0.880

ZEB2

0.863

SMARCA4

0.758

SMARCA2

0.758

USP7

0.752

HDAC1

0.737

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTBP1	EP300	ENSPCAP00000009539	ENSPCAP00000011493	C-terminal binding protein 1.	E1A binding protein p300.	0.858
CTBP1	HDAC1	ENSPCAP00000009539	ENSPCAP00000005589	C-terminal binding protein 1.	Histone deacetylase 1.	0.947
CTBP1	ZEB1	ENSPCAP00000009539	ENSPCAP00000004154	C-terminal binding protein 1.	Zinc finger E-box binding homeobox 1.	0.968
CTBP1	ZEB2	ENSPCAP00000009539	ENSPCAP00000013711	C-terminal binding protein 1.	Zinc finger E-box binding homeobox 2.	0.952
CTBP2	EP300	ENSPCAP00000005932	ENSPCAP00000011493	C-terminal binding protein 2.	E1A binding protein p300.	0.858
CTBP2	HDAC1	ENSPCAP00000005932	ENSPCAP00000005589	C-terminal binding protein 2.	Histone deacetylase 1.	0.947
CTBP2	ZEB1	ENSPCAP00000005932	ENSPCAP00000004154	C-terminal binding protein 2.	Zinc finger E-box binding homeobox 1.	0.968
CTBP2	ZEB2	ENSPCAP00000005932	ENSPCAP00000013711	C-terminal binding protein 2.	Zinc finger E-box binding homeobox 2.	0.952
EP300	CTBP1	ENSPCAP00000011493	ENSPCAP00000009539	E1A binding protein p300.	C-terminal binding protein 1.	0.858
EP300	CTBP2	ENSPCAP00000011493	ENSPCAP00000005932	E1A binding protein p300.	C-terminal binding protein 2.	0.858
EP300	HDAC1	ENSPCAP00000011493	ENSPCAP00000005589	E1A binding protein p300.	Histone deacetylase 1.	0.955
EP300	KMT5A	ENSPCAP00000011493	ENSPCAP00000010599	E1A binding protein p300.	Lysine methyltransferase 5A.	0.418
EP300	SIRT1	ENSPCAP00000011493	ENSPCAP00000012593	E1A binding protein p300.	Sirtuin 1.	0.976
EP300	SMARCA2	ENSPCAP00000011493	ENSPCAP00000015897	E1A binding protein p300.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.641
EP300	SMARCA4	ENSPCAP00000011493	ENSPCAP00000013247	E1A binding protein p300.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.641
EP300	ZEB1	ENSPCAP00000011493	ENSPCAP00000004154	E1A binding protein p300.	Zinc finger E-box binding homeobox 1.	0.960
EP300	ZEB2	ENSPCAP00000011493	ENSPCAP00000013711	E1A binding protein p300.	Zinc finger E-box binding homeobox 2.	0.824
HDAC1	CTBP1	ENSPCAP00000005589	ENSPCAP00000009539	Histone deacetylase 1.	C-terminal binding protein 1.	0.947
HDAC1	CTBP2	ENSPCAP00000005589	ENSPCAP00000005932	Histone deacetylase 1.	C-terminal binding protein 2.	0.947
HDAC1	EP300	ENSPCAP00000005589	ENSPCAP00000011493	Histone deacetylase 1.	E1A binding protein p300.	0.955