Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LPLLipoprotein lipase. (478 aa)    
Predicted Functional Partners:
ENSPCAP00000003215
annotation not available
    
 0.995
APOA5
Apolipoprotein A5.
    
 0.995
APOC2
Apolipoprotein C2.
    
 0.994
APOC3
Apolipoprotein C3.
    
 0.990
LDLR
Low density lipoprotein receptor.
    
 0.977
CETP
Cholesteryl ester transfer protein.
     
 0.976
APOB
Apolipoprotein B.
     
 0.973
PLTP
Phospholipid transfer protein.
     
 0.968
APOA2
Apolipoprotein A2.
     
 0.968
ENSPCAP00000014695
annotation not available
     
 0.968
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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