STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH8G-patch domain containing 8. (1497 aa)    
Predicted Functional Partners:
KRR1
KRR1 small subunit processome component homolog.
  
 
   0.728
DDX10
DEAD-box helicase 10.
    
 0.725
DHX32
DEAH-box helicase 32 (putative).
    
 0.708
DHX15
DEAH-box helicase 15.
    
 0.708
DQX1
DEAQ-box RNA dependent ATPase 1.
    
 0.708
NOL6
Nucleolar protein 6.
    
 
 0.675
DDX18
DEAD-box helicase 18.
    
  0.673
KCTD19
Potassium channel tetramerization domain containing 19.
    
  0.673
ENSPCAP00000013968
annotation not available
    
 
 0.667
DHX9
DExH-box helicase 9.
   
 0.665
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (40%) [HD]