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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF19PHD finger protein 19. (578 aa)    
Predicted Functional Partners:
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 0.980
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.973
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.943
EED
Embryonic ectoderm development.
   
 0.929
KDM6B
Lysine demethylase 6B.
    
 0.909
ENSPCAP00000014192
annotation not available
    
 0.909
INTS1
Integrator complex subunit 1.
    
 0.891
INTS3
Integrator complex subunit 3.
    
 0.884
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.870
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.855
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.