STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (277 aa)    
Predicted Functional Partners:
STIP1
Stress induced phosphoprotein 1.
    
   0.689
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.530
MEGF11
Multiple EGF like domains 11.
      
 0.528
SLC16A4
Solute carrier family 16 member 4.
      
 0.526
ENSPCAP00000001308
annotation not available
      
 0.525
ENSPCAP00000005802
annotation not available
      
 0.499
TTC28
Tetratricopeptide repeat domain 28.
    
   0.489
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
      
 0.489
TTC12
Tetratricopeptide repeat domain 12.
    
   0.489
URGCP
Upregulator of cell proliferation.
      
 0.426
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.