STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD3Chromodomain helicase DNA binding protein 3. (1963 aa)    
Predicted Functional Partners:
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.970
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.962
MTA2
Metastasis associated 1 family member 2.
   
 0.947
MTA1
Metastasis associated 1.
   
 0.937
ENSPCAP00000006786
annotation not available
  
0.927
MTA3
Metastasis associated 1 family member 3.
   
 0.924
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.884
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.884
HDAC1
Histone deacetylase 1.
   
 0.863
HDAC2
Histone deacetylase 2.
   
 0.863
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.