Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004239annotation not available (479 aa)    
Predicted Functional Partners:
ENSPCAP00000005796
annotation not available
   
 0.967
NMD3
NMD3 ribosome export adaptor.
   
 
 0.961
CCDC116
Coiled-coil domain containing 116.
    
   0.954
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.954
SDAD1
SDA1 domain containing 1.
   
 
 0.951
RPF2
Ribosome production factor 2 homolog.
   
 0.935
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.927
ENSPCAP00000005169
annotation not available
   
 0.926
EIF6
Eukaryotic translation initiation factor 6.
   
 0.924
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.921
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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