Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDONCell adhesion associated, oncogene regulated. (1279 aa)    
Predicted Functional Partners:
DHH
Desert hedgehog signaling molecule.
    
 0.989
SHH
Sonic hedgehog signaling molecule.
    
 0.980
IHH
Indian hedgehog signaling molecule.
    
 0.980
PTCH1
Patched 1.
    
 0.974
GAS1
Growth arrest specific 1.
   
 0.963
SMO
Smoothened, frizzled class receptor.
   
 0.954
PTCH2
Patched 2.
    
 0.953
BOC
BOC cell adhesion associated, oncogene regulated.
   
 0.952
LRP2
LDL receptor related protein 2.
     
 0.872
ENSPCAP00000000003
annotation not available
    
 0.814
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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