STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UNKUnk zinc finger. (809 aa)    
Predicted Functional Partners:
USP9X
Ubiquitin specific peptidase 9 X-linked.
    
   0.740
UBE2C
Ubiquitin conjugating enzyme E2 C.
    
   0.713
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
  0.713
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
  0.713
CNOT8
CCR4-NOT transcription complex subunit 8.
    
   0.689
USP34
Ubiquitin specific peptidase 34.
    
 
 0.609
SHTN1
Shootin 1.
    
   0.600
FCAR
Fc fragment of IgA receptor.
      
 0.590
ENSPCAP00000015735
annotation not available
      
 0.575
ENSPCAP00000001816
annotation not available
      
 0.567
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.