Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APP | CELA1 | ENSPCAP00000012953 | ENSPCAP00000011667 | Amyloid beta precursor protein. | Chymotrypsin like elastase 1. | 0.418 |
APP | ENSPCAP00000001345 | ENSPCAP00000012953 | ENSPCAP00000001345 | Amyloid beta precursor protein. | annotation not available | 0.709 |
APP | ENSPCAP00000010485 | ENSPCAP00000012953 | ENSPCAP00000010485 | Amyloid beta precursor protein. | annotation not available | 0.925 |
APP | ENSPCAP00000014868 | ENSPCAP00000012953 | ENSPCAP00000014868 | Amyloid beta precursor protein. | annotation not available | 0.787 |
APP | KLK5 | ENSPCAP00000012953 | ENSPCAP00000004303 | Amyloid beta precursor protein. | Kallikrein related peptidase 5. | 0.842 |
APP | PTK7 | ENSPCAP00000012953 | ENSPCAP00000004375 | Amyloid beta precursor protein. | Protein tyrosine kinase 7 (inactive). | 0.490 |
CELA1 | APP | ENSPCAP00000011667 | ENSPCAP00000012953 | Chymotrypsin like elastase 1. | Amyloid beta precursor protein. | 0.418 |
CELA1 | ENSPCAP00000014868 | ENSPCAP00000011667 | ENSPCAP00000014868 | Chymotrypsin like elastase 1. | annotation not available | 0.806 |
CELA1 | KLK5 | ENSPCAP00000011667 | ENSPCAP00000004303 | Chymotrypsin like elastase 1. | Kallikrein related peptidase 5. | 0.773 |
CELA1 | MET | ENSPCAP00000011667 | ENSPCAP00000009228 | Chymotrypsin like elastase 1. | MET proto-oncogene, receptor tyrosine kinase. | 0.777 |
CELA1 | MST1R | ENSPCAP00000011667 | ENSPCAP00000005117 | Chymotrypsin like elastase 1. | Macrophage stimulating 1 receptor. | 0.782 |
CELA1 | PTK7 | ENSPCAP00000011667 | ENSPCAP00000004375 | Chymotrypsin like elastase 1. | Protein tyrosine kinase 7 (inactive). | 0.677 |
CELA1 | SPINK5 | ENSPCAP00000011667 | ENSPCAP00000010684 | Chymotrypsin like elastase 1. | Serine peptidase inhibitor, Kazal type 5. | 0.570 |
CELA1 | SPINK9 | ENSPCAP00000011667 | ENSPCAP00000014059 | Chymotrypsin like elastase 1. | Serine peptidase inhibitor, Kazal type 9. | 0.506 |
ENSPCAP00000001345 | APP | ENSPCAP00000001345 | ENSPCAP00000012953 | annotation not available | Amyloid beta precursor protein. | 0.709 |
ENSPCAP00000001345 | ENSPCAP00000014868 | ENSPCAP00000001345 | ENSPCAP00000014868 | annotation not available | annotation not available | 0.806 |
ENSPCAP00000001345 | KLK5 | ENSPCAP00000001345 | ENSPCAP00000004303 | annotation not available | Kallikrein related peptidase 5. | 0.695 |
ENSPCAP00000001345 | MET | ENSPCAP00000001345 | ENSPCAP00000009228 | annotation not available | MET proto-oncogene, receptor tyrosine kinase. | 0.777 |
ENSPCAP00000001345 | MST1R | ENSPCAP00000001345 | ENSPCAP00000005117 | annotation not available | Macrophage stimulating 1 receptor. | 0.777 |
ENSPCAP00000001345 | PTK7 | ENSPCAP00000001345 | ENSPCAP00000004375 | annotation not available | Protein tyrosine kinase 7 (inactive). | 0.677 |
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