STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB1Lamin B1. (585 aa)    
Predicted Functional Partners:
LMNA
Lamin A/C.
    
0.986
ENSPCAP00000010631
annotation not available
   
 0.953
CASP6
Caspase 6.
    
 0.923
EMD
Emerin.
    
 0.921
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.874
ENSPCAP00000014858
annotation not available
   
 0.860
ENSPCAP00000010261
annotation not available
    
 0.854
ENSPCAP00000010388
annotation not available
    
 0.854
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.837
LEMD3
LEM domain containing 3.
    
 0.823
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.