Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCA3ATP binding cassette subfamily A member 3. (1626 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
     
 0.839
ABCA4
ATP binding cassette subfamily A member 4.
    
 0.838
ABCA2
ATP binding cassette subfamily A member 2.
    
 0.702
ABCA1
ATP binding cassette subfamily A member 1.
    
 0.702
UIMC1
Ubiquitin interaction motif containing 1.
     
  0.621
ENSPCAP00000006258
annotation not available
    
 0.618
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
   
 
 0.618
SFTPB
Surfactant protein B.
      
 0.584
SFTPC
Surfactant protein C.
      
 0.565
COX15
Cytochrome c oxidase assembly homolog COX15.
    
 0.560
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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