STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR76WD repeat domain 76. (605 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.978
HELLS
Helicase, lymphoid specific.
   
 0.897
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.890
RBX1
Ring-box 1.
    
 0.889
CUL4B
Cullin 4B.
    
 0.868
CUL4A
Cullin 4A.
    
 0.868
ENSPCAP00000013557
annotation not available
    
 0.854
COPS2
COP9 signalosome subunit 2.
    
 0.846
COPS4
COP9 signalosome subunit 4.
    
 0.844
MEIOB
Meiosis specific with OB-fold.
    
 0.830
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.