STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPIARibose 5-phosphate isomerase A. (313 aa)    
Predicted Functional Partners:
ENSPCAP00000007599
annotation not available
  
 0.978
TKT
Transketolase.
   
 0.961
TKTL1
Transketolase like 1.
   
 0.961
PGD
Phosphogluconate dehydrogenase.
   
 
 0.959
ENSPCAP00000008127
annotation not available
  
 0.959
PGM1
Phosphoglucomutase 1.
  
 
 0.945
RBKS
Ribokinase.
    
 0.943
PGM2
Phosphoglucomutase 2.
    
 0.931
RBM45
RNA binding motif protein 45.
   
 
 0.919
XYLB
Xylulokinase.
    
 0.919
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.