Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPAP2RNA polymerase II associated protein 2. (561 aa)    
Predicted Functional Partners:
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
   
 0.998
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
   
 0.998
GPN3
GPN-loop GTPase 3.
    
 
 0.994
POLR2E
RNA polymerase II subunit E.
    
 0.992
ENSPCAP00000005421
annotation not available
    
 0.990
ENSPCAP00000006560
annotation not available
    
 0.989
GPN1
GPN-loop GTPase 1.
    
 
 0.989
POLR2D
RNA polymerase II subunit D.
    
 0.987
POLR2G
RNA polymerase II subunit G.
    
 0.987
POLR2L
RNA polymerase II subunit L.
    
 0.986
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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