STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC5Structural maintenance of chromosomes 5. (1102 aa)    
Predicted Functional Partners:
NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.998
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.998
SMC6
Structural maintenance of chromosomes 6.
   
 0.998
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.997
MAGED2
MAGE family member D2.
   
 0.990
SLF1
SMC5-SMC6 complex localization factor 1.
  
 0.974
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.964
RANBP2
RAN binding protein 2.
  
 0.960
STN1
STN1 subunit of CST complex.
   
 
 0.949
SUMO1
Small ubiquitin like modifier 1.
    
 0.949
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.