PRSS55 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PRSS55

Serine protease 55. (329 aa)

Predicted Functional Partners:

ENSPCAP00000014868

0.806

MST1R

0.777

MET

0.777

PTK7

0.677

WDR90

0.610

ENSPCAP00000015472

0.597

SPINT2

0.569

SPINT1

0.558

ENSPCAP00000013331

0.555

HGFAC

0.551

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000013331	HGFAC	ENSPCAP00000013331	ENSPCAP00000004797	annotation not available	HGF activator.	0.644
ENSPCAP00000013331	PRSS55	ENSPCAP00000013331	ENSPCAP00000004449	annotation not available	Serine protease 55.	0.555
ENSPCAP00000014868	HGFAC	ENSPCAP00000014868	ENSPCAP00000004797	annotation not available	HGF activator.	0.999
ENSPCAP00000014868	MET	ENSPCAP00000014868	ENSPCAP00000009228	annotation not available	MET proto-oncogene, receptor tyrosine kinase.	0.914
ENSPCAP00000014868	MST1R	ENSPCAP00000014868	ENSPCAP00000005117	annotation not available	Macrophage stimulating 1 receptor.	0.914
ENSPCAP00000014868	PRSS55	ENSPCAP00000014868	ENSPCAP00000004449	annotation not available	Serine protease 55.	0.806
ENSPCAP00000014868	PTK7	ENSPCAP00000014868	ENSPCAP00000004375	annotation not available	Protein tyrosine kinase 7 (inactive).	0.870
ENSPCAP00000014868	SPINT1	ENSPCAP00000014868	ENSPCAP00000007863	annotation not available	Serine peptidase inhibitor, Kunitz type 1.	0.409
ENSPCAP00000014868	SPINT2	ENSPCAP00000014868	ENSPCAP00000000592	annotation not available	Serine peptidase inhibitor, Kunitz type 2.	0.409
ENSPCAP00000014868	WDR90	ENSPCAP00000014868	ENSPCAP00000015144	annotation not available	WD repeat domain 90.	0.583
ENSPCAP00000015472	HGFAC	ENSPCAP00000015472	ENSPCAP00000004797	annotation not available	HGF activator.	0.650
ENSPCAP00000015472	MET	ENSPCAP00000015472	ENSPCAP00000009228	annotation not available	MET proto-oncogene, receptor tyrosine kinase.	0.634
ENSPCAP00000015472	MST1R	ENSPCAP00000015472	ENSPCAP00000005117	annotation not available	Macrophage stimulating 1 receptor.	0.634
ENSPCAP00000015472	PRSS55	ENSPCAP00000015472	ENSPCAP00000004449	annotation not available	Serine protease 55.	0.597
HGFAC	ENSPCAP00000013331	ENSPCAP00000004797	ENSPCAP00000013331	HGF activator.	annotation not available	0.644
HGFAC	ENSPCAP00000014868	ENSPCAP00000004797	ENSPCAP00000014868	HGF activator.	annotation not available	0.999
HGFAC	ENSPCAP00000015472	ENSPCAP00000004797	ENSPCAP00000015472	HGF activator.	annotation not available	0.650
HGFAC	MET	ENSPCAP00000004797	ENSPCAP00000009228	HGF activator.	MET proto-oncogene, receptor tyrosine kinase.	0.943
HGFAC	MST1R	ENSPCAP00000004797	ENSPCAP00000005117	HGF activator.	Macrophage stimulating 1 receptor.	0.939
HGFAC	PRSS55	ENSPCAP00000004797	ENSPCAP00000004449	HGF activator.	Serine protease 55.	0.551