Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX6DEAD-box helicase 6. (483 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA decapping 3.
   
 0.999
EDC4
Enhancer of mRNA decapping 4.
   
 0.999
ENSPCAP00000015164
annotation not available
   
 0.999
DCP2
Decapping mRNA 2.
   
 0.998
AGO2
Argonaute RISC catalytic component 2.
   
 0.997
LSM14A
LSM14A mRNA processing body assembly factor.
   
 
 0.995
EIF4E
Eukaryotic translation initiation factor 4E.
   
 0.991
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
   
 0.988
LSM1
LSM1 homolog, mRNA degradation associated.
   
 0.987
ENSPCAP00000011003
annotation not available
   
 
 0.987
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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