STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLLDNA polymerase lambda. (575 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen.
    
 0.978
XRCC5
X-ray repair cross complementing 5.
    
 0.973
XRCC6
X-ray repair cross complementing 6.
    
 0.972
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
    
 0.970
XRCC1
X-ray repair cross complementing 1.
    
 0.930
LIG3
DNA ligase 3.
   
 0.927
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 0.918
DCLRE1C
DNA cross-link repair 1C.
  
 
 0.899
LIG1
DNA ligase 1.
  
 0.856
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
    
 0.854
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.