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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP3Vesicle associated membrane protein 3. (104 aa)    
Predicted Functional Partners:
STX4
Syntaxin 4.
    
 0.991
STX2
Syntaxin 2.
    
 0.989
SNAP25
Synaptosome associated protein 25.
   
 0.988
STX1B
Syntaxin 1B.
    
 0.987
STX1A
Syntaxin 1A.
    
 0.986
SNAP23
Synaptosome associated protein 23.
   
 0.985
ITSN2
Intersectin 2.
     
 0.980
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.980
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate).
    
 0.976
ENSPCAP00000005676
annotation not available
  
 
0.974
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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