Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004486annotation not available (432 aa)    
Predicted Functional Partners:
RAB27B
RAB27B, member RAS oncogene family.
     
 0.632
RAB27A
RAB27A, member RAS oncogene family.
     
 0.632
KRTCAP3
Keratinocyte associated protein 3.
   
    0.618
LVRN
Laeverin.
      
 0.577
ENSPCAP00000003340
annotation not available
     
 0.491
MYO5A
Myosin VA.
     
 0.491
ENSPCAP00000010175
annotation not available
     
 0.491
ENSPCAP00000010732
annotation not available
      
 0.469
CIAPIN1
Cytokine induced apoptosis inhibitor 1.
      
 0.464
SMTNL1
Smoothelin like 1.
      
 0.464
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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