STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBBP7RB binding protein 7, chromatin remodeling factor. (464 aa)    
Predicted Functional Partners:
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.994
EED
Embryonic ectoderm development.
   
 0.993
AEBP2
AE binding protein 2.
    
 0.993
ENSPCAP00000006786
annotation not available
   
 0.992
MTA2
Metastasis associated 1 family member 2.
   
 0.992
MTA1
Metastasis associated 1.
   
 0.991
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 0.991
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.990
BPTF
Bromodomain PHD finger transcription factor.
    
 0.990
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.990
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.