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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM3Small G protein signaling modulator 3. (747 aa)    
Predicted Functional Partners:
ZMYM4
Zinc finger MYM-type containing 4.
      
 0.525
OTUD3
OTU deubiquitinase 3.
      
 0.523
SGSM1
Small G protein signaling modulator 1.
      
 0.523
ZNF703
Zinc finger protein 703.
      
 0.522
SGSM2
Small G protein signaling modulator 2.
      
 0.522
SMIM7
Small integral membrane protein 7.
    
   0.519
COG4
Component of oligomeric golgi complex 4.
    
   0.519
UFSP2
UFM1 specific peptidase 2.
      
 0.509
NUBPL
Nucleotide binding protein like.
      
 0.508
PC
Pyruvate carboxylase.
     
 0.469
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.