SEPTIN6 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SEPTIN6

Septin 6. (508 aa)

Predicted Functional Partners:

SEPTIN11

0.999

SEPTIN7

0.998

ENSPCAP00000010732

0.998

ENSPCAP00000000091

0.997

ENSPCAP00000000692

0.997

SEPTIN2

0.997

SEPTIN9

0.997

SEPTIN8

0.997

SEPTIN1

0.996

ENSPCAP00000006679

0.961

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000000091	ENSPCAP00000000692	ENSPCAP00000000091	ENSPCAP00000000692	annotation not available	annotation not available	0.997
ENSPCAP00000000091	ENSPCAP00000006679	ENSPCAP00000000091	ENSPCAP00000006679	annotation not available	annotation not available	0.978
ENSPCAP00000000091	ENSPCAP00000010732	ENSPCAP00000000091	ENSPCAP00000010732	annotation not available	annotation not available	0.998
ENSPCAP00000000091	SEPTIN1	ENSPCAP00000000091	ENSPCAP00000008444	annotation not available	Septin 1.	0.997
ENSPCAP00000000091	SEPTIN11	ENSPCAP00000000091	ENSPCAP00000003815	annotation not available	Septin 11.	0.997
ENSPCAP00000000091	SEPTIN2	ENSPCAP00000000091	ENSPCAP00000003130	annotation not available	Septin 2.	0.996
ENSPCAP00000000091	SEPTIN6	ENSPCAP00000000091	ENSPCAP00000004495	annotation not available	Septin 6.	0.997
ENSPCAP00000000091	SEPTIN7	ENSPCAP00000000091	ENSPCAP00000001961	annotation not available	Septin 7.	0.997
ENSPCAP00000000091	SEPTIN8	ENSPCAP00000000091	ENSPCAP00000006705	annotation not available	Septin 8.	0.996
ENSPCAP00000000091	SEPTIN9	ENSPCAP00000000091	ENSPCAP00000005503	annotation not available	Septin 9.	0.996
ENSPCAP00000000692	ENSPCAP00000000091	ENSPCAP00000000692	ENSPCAP00000000091	annotation not available	annotation not available	0.997
ENSPCAP00000000692	ENSPCAP00000006679	ENSPCAP00000000692	ENSPCAP00000006679	annotation not available	annotation not available	0.979
ENSPCAP00000000692	ENSPCAP00000010732	ENSPCAP00000000692	ENSPCAP00000010732	annotation not available	annotation not available	0.998
ENSPCAP00000000692	SEPTIN1	ENSPCAP00000000692	ENSPCAP00000008444	annotation not available	Septin 1.	0.996
ENSPCAP00000000692	SEPTIN11	ENSPCAP00000000692	ENSPCAP00000003815	annotation not available	Septin 11.	0.997
ENSPCAP00000000692	SEPTIN2	ENSPCAP00000000692	ENSPCAP00000003130	annotation not available	Septin 2.	0.996
ENSPCAP00000000692	SEPTIN6	ENSPCAP00000000692	ENSPCAP00000004495	annotation not available	Septin 6.	0.997
ENSPCAP00000000692	SEPTIN7	ENSPCAP00000000692	ENSPCAP00000001961	annotation not available	Septin 7.	0.997
ENSPCAP00000000692	SEPTIN8	ENSPCAP00000000692	ENSPCAP00000006705	annotation not available	Septin 8.	0.997
ENSPCAP00000000692	SEPTIN9	ENSPCAP00000000692	ENSPCAP00000005503	annotation not available	Septin 9.	0.930