STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF827Zinc finger protein 827. (1076 aa)    
Predicted Functional Partners:
ENSPCAP00000007126
annotation not available
    
  0.777
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.754
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.754
ENSPCAP00000014868
annotation not available
    
 0.672
MRPS6
Mitochondrial ribosomal protein S6.
    
 0.577
RNF166
Ring finger protein 166.
    
 0.574
DCLRE1B
DNA cross-link repair 1B.
    
 
 0.562
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.546
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
    
 
 0.544
ENSPCAP00000002326
annotation not available
   
  0.541
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.