Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004533annotation not available (385 aa)    
Predicted Functional Partners:
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
    
 0.777
WDR90
WD repeat domain 90.
    
   0.735
NRIP3
Nuclear receptor interacting protein 3.
    
 
 0.728
ENSPCAP00000005507
annotation not available
    
   0.723
NME8
NME/NM23 family member 8.
    
 
 0.698
ENSPCAP00000005520
annotation not available
      
 0.690
RNF182
Ring finger protein 182.
      
 0.666
EFHB
EF-hand domain family member B.
   
   0.666
C1orf158
Chromosome 1 open reading frame 158.
    
   0.665
C9orf135
Chromosome 9 open reading frame 135.
    
   0.665
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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