Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPOCD1SPOC domain containing 1. (1156 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
   
 
  0.858
POLR2E
RNA polymerase II subunit E.
    
  0.787
ZKSCAN2
Zinc finger with KRAB and SCAN domains 2.
      
 0.769
NIPBL
NIPBL cohesin loading factor.
   
  
 0.766
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
  0.756
PIN1
Peptidylprolyl cis/trans isomerase, NIMA-interacting 1.
    
 
 0.752
ENSPCAP00000000697
annotation not available
    
 0.740
TRIP12
Thyroid hormone receptor interactor 12.
   
    0.693
ENSPCAP00000001528
annotation not available
   
  0.676
POLR2I
RNA polymerase II subunit I.
    
 0.673
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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