Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ULK1Unc-51 like autophagy activating kinase 1. (893 aa)    
Predicted Functional Partners:
ATG13
Autophagy related 13.
   
 0.999
BECN1
Beclin 1.
    
 0.999
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.999
ATG101
Autophagy related 101.
    
 0.998
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.997
MTOR
Mechanistic target of rapamycin kinase.
    
 0.997
ATG14
Autophagy related 14.
    
 0.997
ENSPCAP00000015333
annotation not available
    
 0.996
AMBRA1
Autophagy and beclin 1 regulator 1.
   
 0.994
SQSTM1
Sequestosome 1.
    
 
 0.993
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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