Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POLR1ERNA polymerase I subunit E. (302 aa)    
Predicted Functional Partners:
ZNRD1
Zinc ribbon domain containing 1.
   
 0.999
POLR1A
RNA polymerase I subunit A.
   
 0.999
ENSPCAP00000012073
annotation not available
   
 0.999
POLR1B
RNA polymerase I subunit B.
   
 0.999
ENSPCAP00000014308
annotation not available
   
 0.999
POLR2E
RNA polymerase II subunit E.
   
 0.999
ENSPCAP00000005421
annotation not available
   
 0.997
POLR2K
RNA polymerase II subunit K.
   
 0.996
POLR2L
RNA polymerase II subunit L.
   
 0.996
ENSPCAP00000014022
annotation not available
   
 0.996
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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