GLG1 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

GLG1

Golgi glycoprotein 1. (1196 aa)

Predicted Functional Partners:

SELE

0.955

SELP

0.955

ENSPCAP00000000709

0.954

ENSPCAP00000014661

0.927

TM9SF2

0.917

GOLIM4

0.876

ENSPCAP00000005080

0.856

ENSPCAP00000013392

0.855

ENSPCAP00000000053

0.853

APLP2

0.851

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APLP2	ENSPCAP00000000053	ENSPCAP00000011025	ENSPCAP00000000053	Amyloid beta precursor like protein 2.	annotation not available	0.780
APLP2	ENSPCAP00000005080	ENSPCAP00000011025	ENSPCAP00000005080	Amyloid beta precursor like protein 2.	annotation not available	0.774
APLP2	ENSPCAP00000014661	ENSPCAP00000011025	ENSPCAP00000014661	Amyloid beta precursor like protein 2.	annotation not available	0.504
APLP2	GLG1	ENSPCAP00000011025	ENSPCAP00000004576	Amyloid beta precursor like protein 2.	Golgi glycoprotein 1.	0.851
APLP2	SELE	ENSPCAP00000011025	ENSPCAP00000014744	Amyloid beta precursor like protein 2.	Selectin E.	0.504
APLP2	SELP	ENSPCAP00000011025	ENSPCAP00000015243	Amyloid beta precursor like protein 2.	Selectin P.	0.504
ENSPCAP00000000053	APLP2	ENSPCAP00000000053	ENSPCAP00000011025	annotation not available	Amyloid beta precursor like protein 2.	0.780
ENSPCAP00000000053	ENSPCAP00000005080	ENSPCAP00000000053	ENSPCAP00000005080	annotation not available	annotation not available	0.563
ENSPCAP00000000053	GLG1	ENSPCAP00000000053	ENSPCAP00000004576	annotation not available	Golgi glycoprotein 1.	0.853
ENSPCAP00000000709	GLG1	ENSPCAP00000000709	ENSPCAP00000004576	annotation not available	Golgi glycoprotein 1.	0.954
ENSPCAP00000005080	APLP2	ENSPCAP00000005080	ENSPCAP00000011025	annotation not available	Amyloid beta precursor like protein 2.	0.774
ENSPCAP00000005080	ENSPCAP00000000053	ENSPCAP00000005080	ENSPCAP00000000053	annotation not available	annotation not available	0.563
ENSPCAP00000005080	GLG1	ENSPCAP00000005080	ENSPCAP00000004576	annotation not available	Golgi glycoprotein 1.	0.856
ENSPCAP00000013392	GLG1	ENSPCAP00000013392	ENSPCAP00000004576	annotation not available	Golgi glycoprotein 1.	0.855
ENSPCAP00000014661	APLP2	ENSPCAP00000014661	ENSPCAP00000011025	annotation not available	Amyloid beta precursor like protein 2.	0.504
ENSPCAP00000014661	GLG1	ENSPCAP00000014661	ENSPCAP00000004576	annotation not available	Golgi glycoprotein 1.	0.927
GLG1	APLP2	ENSPCAP00000004576	ENSPCAP00000011025	Golgi glycoprotein 1.	Amyloid beta precursor like protein 2.	0.851
GLG1	ENSPCAP00000000053	ENSPCAP00000004576	ENSPCAP00000000053	Golgi glycoprotein 1.	annotation not available	0.853
GLG1	ENSPCAP00000000709	ENSPCAP00000004576	ENSPCAP00000000709	Golgi glycoprotein 1.	annotation not available	0.954
GLG1	ENSPCAP00000005080	ENSPCAP00000004576	ENSPCAP00000005080	Golgi glycoprotein 1.	annotation not available	0.856