Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTHFSDMethenyltetrahydrofolate synthetase domain containing. (382 aa)    
Predicted Functional Partners:
NOP56
NOP56 ribonucleoprotein.
   
    0.921
NIPSNAP2
Nipsnap homolog 2.
   
    0.920
UTP15
UTP15 small subunit processome component.
   
    0.918
ENSPCAP00000014291
annotation not available
     
 0.912
GART
annotation not available
   
 0.900
ASF1B
Anti-silencing function 1B histone chaperone.
   
    0.797
ASF1A
Anti-silencing function 1A histone chaperone.
   
    0.797
RAB40C
RAB40C, member RAS oncogene family.
   
    0.795
WDR6
WD repeat domain 6.
   
    0.795
MTHFD1
Methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1.
   
 0.791
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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