STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXF1Forkhead box F1. (309 aa)    
Predicted Functional Partners:
HOXB6
Homeobox B6.
   
 
 0.737
RANBP6
RAN binding protein 6.
    
  0.696
KPNB1
Karyopherin subunit beta 1.
    
  0.673
SUOX
Sulfite oxidase.
     
  0.668
SGK3
Serum/glucocorticoid regulated kinase family member 3.
    
 0.662
TNPO3
Transportin 3.
     
  0.659
IPO13
Importin 13.
     
  0.659
IPO11
Importin 11.
     
  0.659
ENSPCAP00000009293
annotation not available
    
 0.648
TNPO1
Transportin 1.
    
  0.639
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.