HELQ protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HELQ

Helicase, POLQ like. (1098 aa)

Predicted Functional Partners:

POLN

0.837

ENSPCAP00000010722

0.832

FANCD2

0.814

ENSPCAP00000012584

0.812

FEN1

0.767

TWNK

0.759

ENSPCAP00000002344

0.755

EXO1

0.755

MRE11

0.745

FANCI

0.690

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000002344	ENSPCAP00000010722	ENSPCAP00000002344	ENSPCAP00000010722	annotation not available	annotation not available	0.480
ENSPCAP00000002344	EXO1	ENSPCAP00000002344	ENSPCAP00000013889	annotation not available	Exonuclease 1.	0.745
ENSPCAP00000002344	FEN1	ENSPCAP00000002344	ENSPCAP00000015985	annotation not available	Flap structure-specific endonuclease 1.	0.826
ENSPCAP00000002344	HELQ	ENSPCAP00000002344	ENSPCAP00000004598	annotation not available	Helicase, POLQ like.	0.755
ENSPCAP00000002344	MRE11	ENSPCAP00000002344	ENSPCAP00000014295	annotation not available	MRE11 homolog, double strand break repair nuclease.	0.597
ENSPCAP00000002344	POLN	ENSPCAP00000002344	ENSPCAP00000013089	annotation not available	DNA polymerase nu.	0.755
ENSPCAP00000002344	TWNK	ENSPCAP00000002344	ENSPCAP00000011785	annotation not available	Twinkle mtDNA helicase.	0.524
ENSPCAP00000010722	ENSPCAP00000002344	ENSPCAP00000010722	ENSPCAP00000002344	annotation not available	annotation not available	0.480
ENSPCAP00000010722	ENSPCAP00000012584	ENSPCAP00000010722	ENSPCAP00000012584	annotation not available	annotation not available	0.786
ENSPCAP00000010722	EXO1	ENSPCAP00000010722	ENSPCAP00000013889	annotation not available	Exonuclease 1.	0.940
ENSPCAP00000010722	FANCD2	ENSPCAP00000010722	ENSPCAP00000002450	annotation not available	FA complementation group D2.	0.990
ENSPCAP00000010722	FANCI	ENSPCAP00000010722	ENSPCAP00000012378	annotation not available	FA complementation group I.	0.991
ENSPCAP00000010722	FEN1	ENSPCAP00000010722	ENSPCAP00000015985	annotation not available	Flap structure-specific endonuclease 1.	0.920
ENSPCAP00000010722	HELQ	ENSPCAP00000010722	ENSPCAP00000004598	annotation not available	Helicase, POLQ like.	0.832
ENSPCAP00000010722	MRE11	ENSPCAP00000010722	ENSPCAP00000014295	annotation not available	MRE11 homolog, double strand break repair nuclease.	0.835
ENSPCAP00000010722	POLN	ENSPCAP00000010722	ENSPCAP00000013089	annotation not available	DNA polymerase nu.	0.830
ENSPCAP00000012584	ENSPCAP00000010722	ENSPCAP00000012584	ENSPCAP00000010722	annotation not available	annotation not available	0.786
ENSPCAP00000012584	EXO1	ENSPCAP00000012584	ENSPCAP00000013889	annotation not available	Exonuclease 1.	0.890
ENSPCAP00000012584	FANCD2	ENSPCAP00000012584	ENSPCAP00000002450	annotation not available	FA complementation group D2.	0.915
ENSPCAP00000012584	FANCI	ENSPCAP00000012584	ENSPCAP00000012378	annotation not available	FA complementation group I.	0.807