STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD3SET domain containing 3, actin histidine methyltransferase. (445 aa)    
Predicted Functional Partners:
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
   
 0.833
ENSPCAP00000014951
annotation not available
   
 0.773
ACLY
ATP citrate lyase.
   
 0.764
RAB40C
RAB40C, member RAS oncogene family.
   
    0.737
SUCLG1
succinate-CoA ligase alpha subunit.
   
 
 0.715
ENSPCAP00000010220
annotation not available
   
 
 0.713
DLST
Dihydrolipoamide S-succinyltransferase.
   
 
 0.703
ENSPCAP00000013473
annotation not available
     
 0.689
MINDY1
MINDY lysine 48 deubiquitinase 1.
    
 0.681
MINDY2
MINDY lysine 48 deubiquitinase 2.
    
 0.681
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.