STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SETD3SET domain containing 3, actin histidine methyltransferase. (445 aa)    
Predicted Functional Partners:
ENSPCAP00000010220
annotation not available
   
 
 0.816
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
   
 0.774
ENSPCAP00000007607
annotation not available
   
 0.769
RAB40C
RAB40C, member RAS oncogene family.
   
    0.740
NSD3
Nuclear receptor binding SET domain protein 3.
     
 0.729
RBKS
Ribokinase.
    
 0.717
ENSPCAP00000014951
annotation not available
   
 0.716
ACLY
ATP citrate lyase.
   
 0.701
MINDY1
MINDY lysine 48 deubiquitinase 1.
    
 0.675
MINDY2
MINDY lysine 48 deubiquitinase 2.
    
 0.675
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.