STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPBGTrophoblast glycoprotein. (421 aa)    
Predicted Functional Partners:
OPLAH
5-oxoprolinase, ATP-hydrolysing.
      
 0.769
NTNG1
Netrin G1.
    
 0.745
ENSPCAP00000014868
annotation not available
    
 0.743
MST1R
Macrophage stimulating 1 receptor.
  
 
 0.704
ENSPCAP00000007126
annotation not available
   
  0.674
LRRC3
Leucine rich repeat containing 3.
    
 0.668
C1QL1
Complement C1q like 1.
    
 0.617
METTL27
Methyltransferase like 27.
    
 
 0.612
ENSPCAP00000013571
annotation not available
    
 
 0.594
SFRP2
Secreted frizzled related protein 2.
    
 
 0.589
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.