Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHL1Cell adhesion molecule L1 like. (1223 aa)    
Predicted Functional Partners:
CNTN1
Contactin 1.
   
 0.968
CNTN2
Contactin 2.
   
 0.921
NRP1
Neuropilin 1.
    
 0.909
NRP2
Neuropilin 2.
   
 0.806
CNTN6
Contactin 6.
   
 0.784
CNTN4
Contactin 4.
   
 0.757
CNTN3
Contactin 3.
   
 0.754
CNTN5
Contactin 5.
   
 0.754
NCAM2
Neural cell adhesion molecule 2.
   
 0.727
NCAM1
Neural cell adhesion molecule 1.
   
 0.727
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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