Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004686annotation not available (842 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
      
 0.886
ENSPCAP00000006248
annotation not available
    
   0.865
ENSPCAP00000008540
annotation not available
    
   0.865
RBM17
RNA binding motif protein 17.
    
   0.800
SF3A2
Splicing factor 3a subunit 2.
     
 0.784
SRRM1
Serine and arginine repetitive matrix 1.
   
 
 0.754
SF3A3
Splicing factor 3a subunit 3.
      
 0.636
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
  
 0.616
FBXL5
F-box and leucine rich repeat protein 5.
      
 0.586
ATP6V0A1
ATPase H+ transporting V0 subunit a1.
      
 0.584
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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