Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YJU2YJU2 splicing factor homolog. (321 aa)    
Predicted Functional Partners:
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.998
PRPF19
pre-mRNA processing factor 19.
    
 0.998
ENSPCAP00000008890
annotation not available
    
 0.996
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.996
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.995
DHX38
DEAH-box helicase 38.
   
 0.994
DHX35
DEAH-box helicase 35.
   
 0.993
CDC40
Cell division cycle 40.
   
 0.993
PRPF8
pre-mRNA processing factor 8.
    
 0.993
PLRG1
Pleiotropic regulator 1.
    
 0.993
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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