close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPV5Transient receptor potential cation channel subfamily V member 5. (591 aa)    
Predicted Functional Partners:
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
    
 0.830
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.830
PRKCG
Protein kinase C gamma.
    
  0.826
TRPM2
Transient receptor potential cation channel subfamily M member 2.
     
 0.826
PRKCB
Protein kinase C beta.
    
  0.810
PRKCA
Protein kinase C alpha.
    
  0.810
CALM3
Calmodulin 3.
    
 
 0.650
ENSPCAP00000008234
annotation not available
    
 
 0.650
CALM1
Calmodulin 1.
    
 
 0.650
ENSPCAP00000009496
annotation not available
    
 
 0.650
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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