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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004716annotation not available (418 aa)    
Predicted Functional Partners:
ETF1
Eukaryotic translation termination factor 1.
    
 
 0.677
ALKBH1
alkB homolog 1, histone H2A dioxygenase.
   
  
 0.572
ALKBH4
alkB homolog 4, lysine demethylase.
   
  
 0.530
KDM8
Lysine demethylase 8.
      
 0.523
ALKBH5
alkB homolog 5, RNA demethylase.
   
  
 0.520
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
      
 0.509
ALKBH6
alkB homolog 6.
      
 0.497
ALKBH7
alkB homolog 7.
   
  
 0.492
ENSPCAP00000012648
annotation not available
      
 0.491
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
   
  
 0.475
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.