STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)    
Predicted Functional Partners:
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.986
RANBP2
RAN binding protein 2.
   
  0.981
ENSPCAP00000001998
annotation not available
   
 0.980
ENSPCAP00000013369
annotation not available
   
 0.980
CASC3
CASC3 exon junction complex subunit.
    
 0.973
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.956
ENSPCAP00000003832
annotation not available
   
 0.943
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.941
ENSPCAP00000004823
annotation not available
   
 0.939
ALYREF
Aly/REF export factor.
   
 0.938
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.