TRIM25 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

TRIM25

Tripartite motif containing 25. (626 aa)

Predicted Functional Partners:

ENSPCAP00000015075

0.990

ENSPCAP00000000081

0.922

IFIH1

0.899

UBE2L6

0.889

UBC

0.832

IRF3

0.696

UBE2D1

0.691

EIF2AK2

0.657

ENSPCAP00000012377

0.647

UBE2E3

0.640

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF2AK2	ENSPCAP00000000081	ENSPCAP00000012218	ENSPCAP00000000081	Eukaryotic translation initiation factor 2 alpha kinase 2.	annotation not available	0.402
EIF2AK2	ENSPCAP00000015075	ENSPCAP00000012218	ENSPCAP00000015075	Eukaryotic translation initiation factor 2 alpha kinase 2.	annotation not available	0.959
EIF2AK2	IFIH1	ENSPCAP00000012218	ENSPCAP00000007183	Eukaryotic translation initiation factor 2 alpha kinase 2.	Interferon induced with helicase C domain 1.	0.909
EIF2AK2	IRF3	ENSPCAP00000012218	ENSPCAP00000008035	Eukaryotic translation initiation factor 2 alpha kinase 2.	Interferon regulatory factor 3.	0.480
EIF2AK2	TRIM25	ENSPCAP00000012218	ENSPCAP00000004785	Eukaryotic translation initiation factor 2 alpha kinase 2.	Tripartite motif containing 25.	0.657
EIF2AK2	UBC	ENSPCAP00000012218	ENSPCAP00000008325	Eukaryotic translation initiation factor 2 alpha kinase 2.	Ubiquitin C.	0.516
EIF2AK2	UBE2E3	ENSPCAP00000012218	ENSPCAP00000005473	Eukaryotic translation initiation factor 2 alpha kinase 2.	Ubiquitin conjugating enzyme E2 E3.	0.405
EIF2AK2	UBE2L6	ENSPCAP00000012218	ENSPCAP00000010853	Eukaryotic translation initiation factor 2 alpha kinase 2.	Ubiquitin conjugating enzyme E2 L6.	0.610
ENSPCAP00000000081	EIF2AK2	ENSPCAP00000000081	ENSPCAP00000012218	annotation not available	Eukaryotic translation initiation factor 2 alpha kinase 2.	0.402
ENSPCAP00000000081	ENSPCAP00000015075	ENSPCAP00000000081	ENSPCAP00000015075	annotation not available	annotation not available	0.508
ENSPCAP00000000081	IFIH1	ENSPCAP00000000081	ENSPCAP00000007183	annotation not available	Interferon induced with helicase C domain 1.	0.507
ENSPCAP00000000081	TRIM25	ENSPCAP00000000081	ENSPCAP00000004785	annotation not available	Tripartite motif containing 25.	0.922
ENSPCAP00000000081	UBC	ENSPCAP00000000081	ENSPCAP00000008325	annotation not available	Ubiquitin C.	0.997
ENSPCAP00000000081	UBE2D1	ENSPCAP00000000081	ENSPCAP00000006515	annotation not available	Ubiquitin conjugating enzyme E2 D1.	0.642
ENSPCAP00000000081	UBE2E3	ENSPCAP00000000081	ENSPCAP00000005473	annotation not available	Ubiquitin conjugating enzyme E2 E3.	0.608
ENSPCAP00000000081	UBE2L6	ENSPCAP00000000081	ENSPCAP00000010853	annotation not available	Ubiquitin conjugating enzyme E2 L6.	0.705
ENSPCAP00000012377	ENSPCAP00000015075	ENSPCAP00000012377	ENSPCAP00000015075	annotation not available	annotation not available	0.711
ENSPCAP00000012377	IFIH1	ENSPCAP00000012377	ENSPCAP00000007183	annotation not available	Interferon induced with helicase C domain 1.	0.469
ENSPCAP00000012377	TRIM25	ENSPCAP00000012377	ENSPCAP00000004785	annotation not available	Tripartite motif containing 25.	0.647
ENSPCAP00000015075	EIF2AK2	ENSPCAP00000015075	ENSPCAP00000012218	annotation not available	Eukaryotic translation initiation factor 2 alpha kinase 2.	0.959