STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA3GATA binding protein 3. (442 aa)    
Predicted Functional Partners:
TBX21
T-box transcription factor 21.
   
 0.957
ENSPCAP00000013779
annotation not available
    
 0.941
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.891
EP300
E1A binding protein p300.
    
 0.884
ENSPCAP00000014347
annotation not available
    
 0.881
ZFPM1
Zinc finger protein, FOG family member 1.
    
 0.803
USP21
Ubiquitin specific peptidase 21.
    
 0.799
LDB1
LIM domain binding 1.
    
 0.790
ENSPCAP00000003966
annotation not available
    
 0.789
CREBBP
CREB binding protein.
    
 0.761
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.