Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIC8BRIC8 guanine nucleotide exchange factor B. (559 aa)    
Predicted Functional Partners:
GNAL
G protein subunit alpha L.
   
 
 0.943
MAGED2
MAGE family member D2.
    
   0.844
RTP1
Receptor transporter protein 1.
      
 0.777
NDUFAF2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
   
 
 0.770
NAP1L1
Nucleosome assembly protein 1 like 1.
    
   0.736
NCS1
Neuronal calcium sensor 1.
    
 
 0.734
GNAO1
G protein subunit alpha o1.
    
 
 0.651
STOML3
Stomatin like 3.
   
  
 0.646
STOM
Stomatin.
   
  
 0.646
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
   
 
  0.621
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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