Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (332 aa)    
Predicted Functional Partners:
SUPT7L
SPT7 like, STAGA complex gamma subunit.
    
 0.998
TAF12
TATA-box binding protein associated factor 12.
   
 0.998
TADA2B
Transcriptional adaptor 2B.
    
 0.998
TADA3
Transcriptional adaptor 3.
    
 0.998
SUPT20H
SPT20 homolog, SAGA complex component.
    
 0.998
TAF6L
TATA-box binding protein associated factor 6 like.
    
 0.998
TRRAP
Transformation/transcription domain associated protein.
    
 0.998
SF3B3
Splicing factor 3b subunit 3.
    
 0.997
TADA2A
Transcriptional adaptor 2A.
    
 0.997
TAF5L
TATA-box binding protein associated factor 5 like.
    
 0.997
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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