Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SENP6SUMO specific peptidase 6. (930 aa)    
Predicted Functional Partners:
PRPF19
pre-mRNA processing factor 19.
   
 
 0.954
SUMO1
Small ubiquitin like modifier 1.
   
 0.934
SENP2
SUMO specific peptidase 2.
   
 0.895
SENP5
SUMO specific peptidase 5.
   
 0.886
SENP1
SUMO specific peptidase 1.
   
 0.886
ENSPCAP00000014776
annotation not available
   
 0.886
ENSPCAP00000012051
annotation not available
   
 0.871
UBA2
Ubiquitin like modifier activating enzyme 2.
    
 
 0.844
ZNF638
Zinc finger protein 638.
   
   0.843
RUVBL2
RuvB like AAA ATPase 2.
    
  0.814
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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