CHRDL2 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CHRDL2

Chordin like 2. (422 aa)

Predicted Functional Partners:

ENSPCAP00000009353

0.757

MYSM1

0.741

ENSPCAP00000014868

0.677

RMND5A

0.672

ARID4A

0.585

ENSPCAP00000003739

0.585

SLF1

0.578

LVRN

0.577

ENSPCAP00000010036

0.569

BMP4

0.561

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	CHRDL2	ENSPCAP00000002075	ENSPCAP00000004882	AT-rich interaction domain 4A.	Chordin like 2.	0.585
ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	ENSPCAP00000003739	AT-rich interaction domain 4A.	annotation not available	0.862
ARID4A	MYSM1	ENSPCAP00000002075	ENSPCAP00000012781	AT-rich interaction domain 4A.	Myb like, SWIRM and MPN domains 1.	0.835
ARID4A	SLF1	ENSPCAP00000002075	ENSPCAP00000003732	AT-rich interaction domain 4A.	SMC5-SMC6 complex localization factor 1.	0.401
BMP4	CHRDL2	ENSPCAP00000000527	ENSPCAP00000004882	Bone morphogenetic protein 4.	Chordin like 2.	0.561
BMP4	ENSPCAP00000010036	ENSPCAP00000000527	ENSPCAP00000010036	Bone morphogenetic protein 4.	annotation not available	0.681
CHRDL2	ARID4A	ENSPCAP00000004882	ENSPCAP00000002075	Chordin like 2.	AT-rich interaction domain 4A.	0.585
CHRDL2	BMP4	ENSPCAP00000004882	ENSPCAP00000000527	Chordin like 2.	Bone morphogenetic protein 4.	0.561
CHRDL2	ENSPCAP00000003739	ENSPCAP00000004882	ENSPCAP00000003739	Chordin like 2.	annotation not available	0.585
CHRDL2	ENSPCAP00000009353	ENSPCAP00000004882	ENSPCAP00000009353	Chordin like 2.	annotation not available	0.757
CHRDL2	ENSPCAP00000010036	ENSPCAP00000004882	ENSPCAP00000010036	Chordin like 2.	annotation not available	0.569
CHRDL2	ENSPCAP00000014868	ENSPCAP00000004882	ENSPCAP00000014868	Chordin like 2.	annotation not available	0.677
CHRDL2	LVRN	ENSPCAP00000004882	ENSPCAP00000007491	Chordin like 2.	Laeverin.	0.577
CHRDL2	MYSM1	ENSPCAP00000004882	ENSPCAP00000012781	Chordin like 2.	Myb like, SWIRM and MPN domains 1.	0.741
CHRDL2	RMND5A	ENSPCAP00000004882	ENSPCAP00000013946	Chordin like 2.	Required for meiotic nuclear division 5 homolog A.	0.672
CHRDL2	SLF1	ENSPCAP00000004882	ENSPCAP00000003732	Chordin like 2.	SMC5-SMC6 complex localization factor 1.	0.578
ENSPCAP00000003739	ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	annotation not available	AT-rich interaction domain 4A.	0.862
ENSPCAP00000003739	CHRDL2	ENSPCAP00000003739	ENSPCAP00000004882	annotation not available	Chordin like 2.	0.585
ENSPCAP00000003739	MYSM1	ENSPCAP00000003739	ENSPCAP00000012781	annotation not available	Myb like, SWIRM and MPN domains 1.	0.843
ENSPCAP00000003739	SLF1	ENSPCAP00000003739	ENSPCAP00000003732	annotation not available	SMC5-SMC6 complex localization factor 1.	0.401