ENSPCAP00000004883 protein (Procavia capensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPCAP00000004883

annotation not available (193 aa)

Predicted Functional Partners:

ENSPCAP00000010020

0.879

ENSPCAP00000008749

0.868

ENSPCAP00000009277

0.868

PTPN6

0.868

ENSPCAP00000003267

0.867

SYK

0.867

ZAP70

0.857

ENSPCAP00000004962

0.842

ENSPCAP00000012906

0.827

PTPN11

0.827

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000003267	ENSPCAP00000004883	ENSPCAP00000003267	ENSPCAP00000004883	annotation not available	annotation not available	0.867
ENSPCAP00000003267	ENSPCAP00000004962	ENSPCAP00000003267	ENSPCAP00000004962	annotation not available	annotation not available	0.872
ENSPCAP00000003267	ENSPCAP00000008749	ENSPCAP00000003267	ENSPCAP00000008749	annotation not available	annotation not available	0.876
ENSPCAP00000003267	ENSPCAP00000009277	ENSPCAP00000003267	ENSPCAP00000009277	annotation not available	annotation not available	0.878
ENSPCAP00000003267	ENSPCAP00000010020	ENSPCAP00000003267	ENSPCAP00000010020	annotation not available	annotation not available	0.877
ENSPCAP00000003267	ENSPCAP00000012906	ENSPCAP00000003267	ENSPCAP00000012906	annotation not available	annotation not available	0.484
ENSPCAP00000003267	PTPN11	ENSPCAP00000003267	ENSPCAP00000013324	annotation not available	Protein tyrosine phosphatase non-receptor type 11.	0.484
ENSPCAP00000003267	PTPN6	ENSPCAP00000003267	ENSPCAP00000011386	annotation not available	Protein tyrosine phosphatase non-receptor type 6.	0.484
ENSPCAP00000003267	SYK	ENSPCAP00000003267	ENSPCAP00000015819	annotation not available	Spleen associated tyrosine kinase.	0.945
ENSPCAP00000003267	ZAP70	ENSPCAP00000003267	ENSPCAP00000003926	annotation not available	Zeta chain of T cell receptor associated protein kinase 70.	0.937
ENSPCAP00000004883	ENSPCAP00000003267	ENSPCAP00000004883	ENSPCAP00000003267	annotation not available	annotation not available	0.867
ENSPCAP00000004883	ENSPCAP00000004962	ENSPCAP00000004883	ENSPCAP00000004962	annotation not available	annotation not available	0.842
ENSPCAP00000004883	ENSPCAP00000008749	ENSPCAP00000004883	ENSPCAP00000008749	annotation not available	annotation not available	0.868
ENSPCAP00000004883	ENSPCAP00000009277	ENSPCAP00000004883	ENSPCAP00000009277	annotation not available	annotation not available	0.868
ENSPCAP00000004883	ENSPCAP00000010020	ENSPCAP00000004883	ENSPCAP00000010020	annotation not available	annotation not available	0.879
ENSPCAP00000004883	ENSPCAP00000012906	ENSPCAP00000004883	ENSPCAP00000012906	annotation not available	annotation not available	0.827
ENSPCAP00000004883	PTPN11	ENSPCAP00000004883	ENSPCAP00000013324	annotation not available	Protein tyrosine phosphatase non-receptor type 11.	0.827
ENSPCAP00000004883	PTPN6	ENSPCAP00000004883	ENSPCAP00000011386	annotation not available	Protein tyrosine phosphatase non-receptor type 6.	0.868
ENSPCAP00000004883	SYK	ENSPCAP00000004883	ENSPCAP00000015819	annotation not available	Spleen associated tyrosine kinase.	0.867
ENSPCAP00000004883	ZAP70	ENSPCAP00000004883	ENSPCAP00000003926	annotation not available	Zeta chain of T cell receptor associated protein kinase 70.	0.857