Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEGR1Neuronal growth regulator 1. (354 aa)    
Predicted Functional Partners:
TMEM18
Transmembrane protein 18.
      
 0.768
ENSPCAP00000005230
annotation not available
    
 
 0.719
IGLON5
IgLON family member 5.
    
 
 0.719
MTCH2
Mitochondrial carrier 2.
   
  
 0.634
L1CAM
L1 cell adhesion molecule.
   
 0.613
ALCAM
Activated leukocyte cell adhesion molecule.
    
 0.611
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
   
 0.594
LINGO2
Leucine rich repeat and Ig domain containing 2.
    
 0.592
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.581
PRKCD
Protein kinase C delta.
     
 0.579
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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