Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004908annotation not available (200 aa)    
Predicted Functional Partners:
PABPN1
poly(A) binding protein nuclear 1.
   
 0.871
PAN3
poly(A) specific ribonuclease subunit PAN3.
    
 0.844
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.840
EIF4A2
Eukaryotic translation initiation factor 4A2.
   
 0.791
PAN2
poly(A) specific ribonuclease subunit PAN2.
    
 0.791
EIF4A1
Eukaryotic translation initiation factor 4A1.
   
 0.791
NCBP2
Nuclear cap binding protein subunit 2.
   
 0.780
RPS3A
Ribosomal protein S3A.
   
 0.758
ENSPCAP00000003355
annotation not available
   
 0.754
ENSPCAP00000015164
annotation not available
    
 0.753
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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